Department of Computer Science

Pekka Marttinen

Academy Research Fellow

Contact information

Postal address
Aalto SCI Computer Science Konemiehentie 2
Mobile phone
+358505124362
Full researcher profile
https://research.aalto.fi/...

Research groups

Centre of Excellence in Computational Inference, COIN, Postdoctoral Researcher
Professorship Marttinen P., Assistant Professor

Publications

Centre of Excellence in Computational Inference, COIN, School services, SCI, Department of Computer Science, Professorship Marttinen P., Probabilistic Machine Learning, Helsinki Institute for Information Technology HIIT, Professorship Kaski S., Finnish Center for Artificial Intelligence

Modelling G×E with historical weather information improves genomic prediction in new environments

Publishing year: 2019 Bioinformatics (Oxford, England)
Department of Computer Science, Finnish Center for Artificial Intelligence, Probabilistic Machine Learning, Helsinki Institute for Information Technology HIIT, Professorship Kaski S., Centre of Excellence in Computational Inference, COIN, Professorship Marttinen P.

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

Publishing year: 2019 Nature Communications
Probabilistic Machine Learning, Helsinki Institute for Information Technology HIIT, Professorship Kaski S., Centre of Excellence in Computational Inference, COIN, Department of Computer Science, Professorship Vehtari A., Professorship Marttinen P.

Efficient acquisition rules for model-based approximate Bayesian computation

Publishing year: 2019 Bayesian Analysis
Probabilistic Machine Learning, Helsinki Institute for Information Technology HIIT, Professorship Kaski S., Centre of Excellence in Computational Inference, COIN, Department of Computer Science, Professorship Marttinen P.

A Bayesian model of acquisition and clearance of bacterial colonization incorporating within-host variation

Publishing year: 2019 PLoS computational biology
Centre of Excellence in Computational Inference, COIN, Professorship Kaski S., Helsinki Institute for Information Technology HIIT, Probabilistic Machine Learning, School services, SCI, Department of Computer Science, Professorship Vehtari A., Professorship Marttinen P.

Batch simulations and uncertainty quantification in Gaussian process surrogate-based approximate Bayesian computation

Publishing year: 2019 Submitted
Centre of Excellence in Computational Inference, COIN, Professorship Kaski S., Helsinki Institute for Information Technology HIIT, Probabilistic Machine Learning, School services, SCI, Department of Computer Science, Professorship Vehtari A., Professorship Marttinen P.

Parallel Gaussian process surrogate method to accelerate likelihood-free inference

Publishing year: 2019 Submitted
Probabilistic Machine Learning, Helsinki Institute for Information Technology HIIT, Professorship Kaski S., Centre of Excellence in Computational Inference, COIN, Department of Computer Science, Professorship Vehtari A., Professorship Marttinen P.

Gaussian process modelling in approximate bayesian computation to estimate horizontal gene transfer in Bacteria

Publishing year: 2018 Annals of Applied Statistics
Centre of Excellence in Computational Inference, COIN, Professorship Kaski S., Helsinki Institute for Information Technology HIIT, Probabilistic Machine Learning, School services, SCI, Department of Computer Science, Professorship Marttinen P.

A Bayesian model of acquisition and clearance of bacterial colonization

Publishing year: 2018
Department of Computer Science, Centre of Excellence in Computational Inference, COIN, Professorship Kaski S., Helsinki Institute for Information Technology HIIT, Probabilistic Machine Learning, Professorship Marttinen P., Professorship Vehtari A.

ELFI

Publishing year: 2018 Journal of Machine Learning Research
Department of Computer Science, Centre of Excellence in Computational Inference, COIN, Professorship Kaski S.

Bacmeta

Publishing year: 2018 Bioinformatics