Sophie Isabel Wharrie

Doctoral Researcher
T313 Dept. Computer Science
Full researcher profile
https://research.aalto.fi/...

Research groups

  • Probabilistic Machine Learning, Doctoral Researcher
  • Professorship Kaski Samuel, Doctoral Researcher

Publications

A fast method to generate hundreds of thousands of synthetic genomes and phenotypes

Sophie Wharrie, Zhiyu Yang, Vishnu Raj, Rahul Gupta, Remo Monti, Ying Wang, Pier Francesco Palamara, Samuel Kaski, Andrea Ganna, Christoph Lippert, Pekka Marttinen 2023 European journal of human genetics

Characterizing personalized effects of family information on disease risk using graph representation learning

Sophie Wharrie, Zhiyu Yang, Andrea Ganna, Samuel Kaski 2023 Proceedings of the 8th Machine Learning for Healthcare Conference

HAPNEST : efficient, large-scale generation and evaluation of synthetic datasets for genotypes and phenotypes

Sophie Wharrie, Zhiyu Yang, Vishnu Raj, Remo Monti, Rahul Gupta, Ying Wang, Alicia Martin, Luke J. O'Connor, Samuel Kaski, Pekka Marttinen, Pier Francesco Palamara, Christoph Lippert, Andrea Ganna 2023 Bioinformatics (Oxford, England)

HAPNEST: an efficient tool for generating large-scale genetics datasets from limited training data

Sophie Wharrie, Zhiyu Yang, Vishnu Raj, Remo Monti, Rahul Gupta, Ying Wang, Alicia Martin, Luke J O'Connor, Samuel Kaski, Pekka Marttinen, Pier Francesco Palamara, Christoph Lippert, Andrea Ganna 2022