Baran Aydogan
Contingent Worker
Contingent Worker
T314 Dept. Neuroscience and Biomedical Engineering
Full researcher profile
https://research.aalto.fi/...
Utmärkelser
MICCAI Young Scientist Award
Award or honor granted for a specific work
Department of Neuroscience and Biomedical Engineering
Jan 2016
ISMRM Tractography-reproducibility Challenge with Empirical Data (TraCED)
Rank 2
Invitation or ranking in competition
Department of Neuroscience and Biomedical Engineering
Jan 2017
ISBI 3-D Validation of Tractography with Experimental MRI (3D VoTEM)
Winner of phantom challenge
Invitation or ranking in competition
Department of Neuroscience and Biomedical Engineering
Jan 2018
Diffusion MRI processing pipeline for real-time tractography-based nTMS
Best abstract selected by the audience
Award or honor granted for a specific work
Department of Neuroscience and Biomedical Engineering
Nov 2019
MICCAI IronTract Tractography Challenge 2019 (Round 1)
Invitation or ranking in competition
Department of Neuroscience and Biomedical Engineering
Jan 2019
MICCAI IronTract Tractography Challenge 2020 (Round 2)
Invitation or ranking in competition
Department of Neuroscience and Biomedical Engineering
Jan 2020
Towards real-time tractography-based TMS neuronavigation
Best poster award
Award or honor granted for a specific work
Department of Neuroscience and Biomedical Engineering
Jan 2021
MICCAI CDMRI'21 DiSCo Tractography Challenge
Invitation or ranking in competition
Department of Neuroscience and Biomedical Engineering
Jan 2021
Publikationer
Depression core network-based individualized targeting for transcranial magnetic stimulation
Tuukka T. Raij, Emma Komulainen, Dogu Baran Aydogan, Siina Pamilo, Erkki Isometsä, Tommi Raij
2023
Brain Stimulation
Network analysis shows decreased ipsilesional structural connectivity in glioma patients
Lucius S. Fekonja, Ziqian Wang, Alberto Cacciola, Timo Roine, D. Baran Aydogan, Darius Mewes, Sebastian Vellmer, Peter Vajkoczy, Thomas Picht
2022
Communications Biology
Identification of proprioceptive thalamocortical tracts in children: comparison of fMRI, MEG, and manual seeding of probabilistic tractography
Julia Jaatela, Dogu Baran Aydogan, Timo Nurmi, Jaakko Vallinoja, Harri Piitulainen
2022
Cerebral Cortex
Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI
Chiara Maffei, Gabriel Girard, Kurt G. Schilling, Dogu Baran Aydogan, Nagesh Adluru, Andrey Zhylka, Ye Wu, Matteo Mancini, Andac Hamamci, Alessia Sarica, Achille Teillac, Steven H. Baete, Davood Karimi, Fang Cheng Yeh, Mert E. Yildiz, Ali Gholipour, Yann Bihan-Poudec, Bassem Hiba, Andrea Quattrone, Aldo Quattrone, Tommy Boshkovski, Nikola Stikov, Pew Thian Yap, Alberto de Luca, Josien Pluim, Alexander Leemans, Vivek Prabhakaran, Barbara B. Bendlin, Andrew L. Alexander, Bennett A. Landman, Erick J. Canales-Rodríguez, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Gaëtan Rensonnet, Simona Schiavi, Alessandro Daducci, Marco Pizzolato, Elda Fischi-Gomez, Jean Philippe Thiran, George Dai, Giorgia Grisot, Nikola Lazovski, Santi Puch, Marc Ramos, Paulo Rodrigues, Vesna Prčkovska, Robert Jones, Julia Lehman, Suzanne N. Haber
2022
NeuroImage
Machine learning-based prediction of motor status in glioma patients using diffusion MRI metrics along the corticospinal tract
Boshra Shams, Ziqian Wang, Timo Roine, Dogu Baran Aydogan, Peter Vajkoczy, Christoph Lippert, Thomas Picht, Lucius S. Fekonja
2022
Brain Communications
Parallel Transport Tractography
Baran Aydogan, Yonggang Shi
2021
IEEE Transactions on Medical Imaging
Detecting Corticospinal Tract Impairment in Tumor Patients With Fiber Density and Tensor-Based Metrics
Lucius S. Fekonja, Ziqian Wang, Dogu B. Aydogan, Timo Roine, Melina Engelhardt, Felix R. Dreyer, Peter Vajkoczy, Thomas Picht
2021
FRONTIERS IN ONCOLOGY
Tractography dissection variability
Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi-Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick J. Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio Innocenti, Jean Philippe Thiran, Laura Mancini, Stephen Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attyé, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M.W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan Mou Yang, Jian Chen, Claire E. Kelly, Chun Hung Yeh, Jerome Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K. Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramírez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A.M.Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Perez, Catherine Lebel, Jess E. Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux
2021
NeuroImage
Tractography reproducibility challenge with empirical data (TraCED)
Vishwesh Nath, Kurt G. Schilling, Prasanna Parvathaneni, Yuankai Huo, Justin A. Blaber, Allison E. Hainline, Muhamed Barakovic, David Romascano, Jonathan Rafael-Patino, Matteo Frigo, Gabriel Girard, Jean Philippe Thiran, Alessandro Daducci, Matt Rowe, Paulo Rodrigues, Vesna Prčkovska, Dogu B. Aydogan, Wei Sun, Yonggang Shi, William A. Parker, Abdol A. Ould Ismail, Ragini Verma, Ryan P. Cabeen, Arthur W. Toga, Allen T. Newton, Jakob Wasserthal, Peter Neher, Klaus Maier-Hein, Giovanni Savini, Fulvia Palesi, Enrico Kaden, Ye Wu, Jianzhong He, Yuanjing Feng, Michael Paquette, Francois Rheault, Jasmeen Sidhu, Catherine Lebel, Alexander Leemans, Maxime Descoteaux, Tim B. Dyrby, Hakmook Kang, Bennett A. Landman
2020
JOURNAL OF MAGNETIC RESONANCE IMAGING
BLOOD-BASED INFLAMMATORY BIOMARKERS FOR PREDICTING THERAPEUTIC RESPONSE IN REGIONAL BRAIN VOLUME CHANGES IN PATIENTS WITH ALZHEIMER’S DISEASE
Aarti Mishra, Gerson D. Hernandez, Claudia Lopez, Baran Aydogan, Yonggang Shi, Meng Law, Lon S. Schneider, Roberta Diaz Brinton
2019
ALZHEIMERS AND DEMENTIA