Emmi Jokinen
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T313 Dept. Computer Science
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https://research.aalto.fi/...
Publikationer
Single-cell characterization of anti-LAG-3 and anti-PD-1 combination treatment in patients with melanoma
Jani Huuhtanen, Henna Kasanen, Katriina Peltola, Tapio Lönnberg, Virpi Glumoff, Oscar Brück, Olli Dufva, Karita Peltonen, Johanna Vikkula, Emmi Jokinen, Mette Ilander, Moon Hee Lee, Siru Mäkelä, Marta Nyakas, Bin Li, Micaela Hernberg, Petri Bono, Harri Lähdesmäki, Anna Kreutzman, Satu Mustjoki
2023
JOURNAL OF CLINICAL INVESTIGATION
TCRconv: predicting recognition between T cell receptors and epitopes using contextualized motifs
Emmi Jokinen, Alexandru Dumitrescu, Jani Huuhtanen, Vladimir Gligorijevic, Satu Mustjoki, Richard Bonneau, Markus Heinonen, Harri Lähdesmäki
2023
Bioinformatics
Evolution and modulation of antigen-specific T cell responses in melanoma patients
Jani Huuhtanen, Liang Chen, Emmi Jokinen, Henna Kasanen, Tapio Lönnberg, Anna Kreutzman, Katriina Peltola, Micaela Hernberg, Chunlin Wang, Cassian Yee, Harri Lähdesmäki, Mark M. Davis, Satu Mustjoki
2022
Nature Communications
Predicting recognition between T cell receptors and epitopes with TCRGP
Emmi Jokinen, Jani Huuhtanen, Satu Mustjoki, Markus Heinonen, Harri Lähdesmäki
2021
PLoS computational biology
Substrate specificity of 2-deoxy-D-ribose 5-phosphate aldolase (DERA) assessed by different protein engineering and machine learning methods
Sanni Voutilainen, Markus Heinonen, Martina Andberg, Emmi Jokinen, Hannu Maaheimo, Johan Pääkkönen, Nina Hakulinen, Juha Rouvinen, Harri Lähdesmäki, Samuel Kaski, Juho Rousu, Merja Penttilä, Anu Koivula
2020
Applied Microbiology and Biotechnology
MGPfusion
Emmi Jokinen, Markus Heinonen, Harri Lähdesmäki
2018
Bioinformatics
Generating data to improve protein stability prediction
Markus Heinonen, Emmi Jokinen, Samuel Kaski, Juho Rousu, Harri Lähdesmäki
2016